Package: makemyprior 1.2.2

Ingeborg Hem
makemyprior: Intuitive Construction of Joint Priors for Variance Parameters
Tool for easy prior construction and visualization. It helps to formulates joint prior distributions for variance parameters in latent Gaussian models. The resulting prior is robust and can be created in an intuitive way. A graphical user interface (GUI) can be used to choose the joint prior, where the user can click through the model and select priors. An extensive guide is available in the GUI. The package allows for direct inference with the specified model and prior. Using a hierarchical variance decomposition, we formulate a joint variance prior that takes the whole model structure into account. In this way, existing knowledge can intuitively be incorporated at the level it applies to. Alternatively, one can use independent variance priors for each model components in the latent Gaussian model. Details can be found in the accompanying scientific paper: Hem, Fuglstad, Riebler (2024, Journal of Statistical Software, <doi:10.18637/jss.v110.i03>).
Authors:
makemyprior_1.2.2.tar.gz
makemyprior_1.2.2.zip(r-4.7)makemyprior_1.2.2.zip(r-4.6)makemyprior_1.2.2.zip(r-4.5)
makemyprior_1.2.2.tgz(r-4.6-any)makemyprior_1.2.2.tgz(r-4.5-any)
makemyprior_1.2.2.tar.gz(r-4.7-any)makemyprior_1.2.2.tar.gz(r-4.6-any)
makemyprior_1.2.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
makemyprior/json (API)
| # Install 'makemyprior' in R: |
| install.packages('makemyprior', repos = c('https://ingebogh.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ingebogh/makemyprior/issues
- latin_data - Latin square experiment data
- neonatal_data - Neonatal mortality data
- wheat_data - Genomic wheat breeding model data
Last updated from:ab64744f1e. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 216 | ||
| source / vignettes | OK | 233 | ||
| linux-release-x86_64 | OK | 217 | ||
| macos-release-arm64 | OK | 155 | ||
| macos-oldrel-arm64 | OK | 111 | ||
| windows-devel | OK | 191 | ||
| windows-release | OK | 182 | ||
| windows-oldrel | OK | 168 | ||
| wasm-release | OK | 176 |
Exports:compile_stancreate_stan_fileeval_joint_prioreval_pc_priorexpitextract_posterior_effectextract_posterior_parameterfind_pc_prior_paramget_parameter_orderinference_inlainference_stanlogitmake_eval_prior_datamake_priormakemyprior_example_modelmakemyprior_guimakemyprior_modelsmakemyprior_plottingmcplot_marginal_priorplot_posterior_fixedplot_posterior_precisionplot_posterior_stanplot_posterior_stdevplot_posterior_varianceplot_priorplot_several_posterior_stanplot_tree_structurescale_precmattypical_variance
Dependencies:base64encbslibcachemclicommonmarkcpp11digestevaluatefarverfastmapfontawesomefsggplot2gluegtablehighrhtmltoolshtmlwidgetshttpuvisobandjquerylibjsonliteknitrlabelinglaterlatticelifecyclemagrittrMASSMatrixmemoisemimeotelpromisesR6rappdirsRColorBrewerRcpprlangrmarkdownS7sassscalesshinyshinyBSshinyjssourcetoolstinytexvctrsviridisLitevisNetworkwithrxfunxtableyaml
Last update: 2024-02-20
Started: 2021-05-18
Last update: 2024-02-20
Started: 2021-05-18
Last update: 2024-02-20
Started: 2021-05-18
Last update: 2023-11-07
Started: 2021-05-18